Package: seawaveQ 2.0.2

seawaveQ: SEAWAVE-Q Model

A model and utilities for analyzing trends in chemical concentrations in streams with a seasonal wave (seawave) and adjustment for streamflow (Q) and other ancillary variables. See Ryberg and York, 2020, <doi:10.3133/ofr20201082>.

Authors:Karen R. Ryberg [aut, cre], Aldo V. Vecchia [aut], Benjamin York [ctb]

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seawaveQ.pdf |seawaveQ.html
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NEWS

# Install 'seawaveQ' in R:
install.packages('seawaveQ', repos = c('https://kryberg-usgs.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.43 score 27 scripts 442 downloads 10 exports 84 dependencies

Last updated 4 years agofrom:e77e54a3f2. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 16 2024
R-4.5-winOKOct 16 2024
R-4.5-linuxOKOct 16 2024
R-4.4-winOKOct 16 2024
R-4.4-macOKOct 16 2024
R-4.3-winOKAug 17 2024
R-4.3-macOKAug 17 2024

Exports:cenScatPlotcombineDatacompwaveconvfitModfitswavecavloadCalculationspesticideTrendCalcsprepDataseawaveQPlotsseawaveQPlots2

Dependencies:backportsbase64encbslibcachemcheckmatecliclustercodetoolscolorspacecpp11data.tabledigestevaluatefansifarverfastmapfontawesomeforeignFormulafsgenericsggplot2gluegridExtragtablehighrHmischtmlTablehtmltoolshtmlwidgetsisobandjquerylibjsonliteknitrlabelinglatticelifecyclelubridatemagrittrMASSMatrixMatrixModelsmemoisemgcvmimemultcompmunsellmvtnormnlmennetpillarpkgconfigplyrpolsplinequantregR6rappdirsRColorBrewerRcppreshape2rlangrmarkdownrmsrpartrstudioapisandwichsassscalesSparseMstringistringrsurvivalTH.datatibbletimechangetinytexutf8vctrsviridisviridisLitewithrxfunyamlzoo

Using seawaveQ

Rendered fromvignette.Rnwusingutils::Sweaveon Oct 16 2024.

Last update: 2020-08-04
Started: 2013-12-13

Readme and manuals

Help Manual

Help pageTopics
A model and utilities for analyzing trends in chemical concentrations in streams with a seasonal wave (seawave) and adjustment for streamflow (Q) and other ancillary variables (Q) and other ancillary variablesseawaveQ-package seawaveQ
Scatter plot of water-quality datacenScatPlot
Combine water-quality sample data and continuous ancillary variablescombineData
Seasonal Wave Computationcompwaveconv
Continuously monitored (daily) data for 06610000 Missouri River at Omaha, Neb.cqwMoRivOmaha
Example continuous ancillary variable data.examplecavdat
Example continuous ancillary variable matrix.examplecavmat
Example water-quality data.examplecdatsub
Example logical vector.examplecentmp
Example of logarithmically transformed concentration data.exampleclog
Example data indicators.exampleqwcols
Example matrix for internal use.examplestpars
Example numeric vector used internally.exampletndlin
Example numeric vector used internally.exampletndlinpr
Example numeric vector used internally.exampletseas
Example numeric vector used internally.exampletseaspr
Example numeric vector used internally.exampletyr
Example numeric vector used internally.exampletyrpr
Internal function that fits the seawaveQ model.fitMod
Fit seasonal wave and continuous ancillary data for trend analysisfitswavecav
Water-quality data for 05586100 Illinois River at Valley City, Ill.IllRivValleyCty
Calculate annual loads and summarize trendsloadCalculations
Summarize linear trendspesticideTrendCalcs
Prepares concentration data and continuous ancillary dataprepData
Water-quality data for 06610000 Missouri River at Omaha, Nebr.qwMoRivOmaha
Internal function that generates plots of data and model results.seawaveQPlots
Internal function that generates plots of data and model results.seawaveQPlots2